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Sup35 20x2 protofibril with 2 free peptides
Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 2 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate). -
Sup35 20x2 protofibril with 2+3 free peptides
Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 2+3 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate). -
Sup35 20x2 protofibril with 2+3+7 free peptides
Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 2+3+7 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate). -
Sup35 20x2 protofibril with 5 free peptides
Sup35 protofibril (20x2) growth via elongation by addition of monomers at the ends with 5 free peptides studied by MD with GROMOS 54A7 in GROMACS (1 replicate). -
Beta peptide 3
Beta peptide 3 with GROMOS 54A8 in GROMOS (replicate 1 of 1). -
Beta peptide 2
Beta peptide 2 with GROMOS 54A8 in GROMOS (replicate 1 of 1). -
Beta peptide 1
Beta peptide 1 with GROMOS 54A8 in GROMOS (replicate 1 of 1). -
Endothelial monocyte-activating polypeptide II
Endothelial monocyte-activating polypeptide II with GROMOS 54A8 in GROMOS (replicate 2 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1FL0, URL:... -
Beta peptide 3
Beta peptide 3 with GROMOS 54A7 in GROMOS (replicate 1 of 1). -
Beta peptide 2
Beta peptide 2 with GROMOS 54A7 in GROMOS (replicate 1 of 1). -
Beta peptide 1
Beta peptide 1 with GROMOS 54A7 in GROMOS (replicate 1 of 1). -
Endothelial monocyte-activating polypeptide II
Endothelial monocyte-activating polypeptide II with GROMOS 54A7 in GROMOS (replicate 2 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1FL0, URL:... -
Chitin binding domain of chitinase
Chitin binding domain of chitinase protein with GROMOS REDO in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 2CWR, URL:... -
Villin headpiece
Villin headpiece protein with GROMOS REDO in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1YU5, URL:... -
Phospholipase A2
Phospholipase A2 protein with GROMOS 54A7 in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1LWB, URL:... -
Phospholipid A2
Phospholipid A2 protein with GROMOS HISA in AMBER (replicate 1 of 1). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1FAZ, URL:... -
Alpha-helical peptide YGG
Alpha-helical peptide YGG with GROMOS 54A7 in AMBER (replicate 1 of 1). -
Alpha-helical peptide YGA
Alpha-helical peptide YGA with GROMOS 54A7 in AMBER (replicate 1 of 1). -
Alpha-helical peptide AP
Alpha-helical peptide AP with GROMOS 54A7 in AMBER (replicate 1 of 1). -
Beta peptide 3
Beta peptide 3 with GROMOS 53A6 in GROMOS (replicate 1 of 1).
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